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PIXLRT is a package can be used for the analysis of(non pseudo-autosomal) SNPs on the X chromosome in case-parent triads. The package can read genotypes in pedigree file format or matrices with number of minor allele copies for each of the mother, father, and affected offspring. The parent-informed X chromosome likelihood ratio test (PIX-LRT) is then used to analyze the data. (Reference: Wise A.S., et al...TBD). There is a readme file "Readme PIX.txt" that contains detailed installation information.
Downloads
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pixlrt_1.0.tar.gz (15.71 KB) - R program to be loaded on a MAC/UNIX -
pixlrt_1.0.zip (34.72 KB) - R program to be loaded on a PC -
readme_pix.txt (1.55 KB) -contains detailed installation information
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